There are a couple different scenarios where a login record could have a blank application Id. Usually it is #1 or #2. It occurs in scenarios where the user can have a JWT/access token that does not have the application Id in it.
If a user is not registered for the Application they are logging into FusionAuth makes a login record when a user is created since FA makes a JWT upon user creation If you use the Login API, you can log in without an App ID because you don't have to provide an application on the API call.-
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Solved Implementing Passwordless Registration with Magic Links in FusionAuth: Limitations and Workarounds
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